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Hi Mike! Thank you for posting that amazing tutorial on Amplicon Analysis. It has been so helpful for getting started in microbiome research. I had a question regarding loss of reads during the dada2 …
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I'm trying to run the dada command to apply the sample inference algorithm to dereplicated data for my 16S samples. It fails for my dadaFs, saying it cannot allocate vector of a different size each ti…
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In some cases, the total number of reads mapped back to (classified) contigs is higher than the total number of (raw) reads. This should not be possible and is probably caused by counting 'multi-mappe…
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Hello,
I start a code for using MIDI events to drive some animation in blender.
Like this : [https://www.youtube.com/watch?v=9N9v5mHrADw](url)
Now, I think it's time to release my work for ever…
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I just read the Dada2 paper and worked through the tutorial. Very impressive work and software! I look forward to including Dada2 into the workflow for several of our current projects.
I apologiz…
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### Application Crash
#### System
| | |
|------------ | -------------|
|Platform | win32 10.0.20150 |
|Architecture | x64 |
|Application Version | 1.2.17 |
|Process | renderer |
#### Message
Cannot r…
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The filtering and dereplication worked out perfectly, but now I'm having trouble training the parametric error model. I'm following the big data tutorial but end up getting this error:
> set.seed(100…
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Ciao,
I am using dada2 on PacBio sequences for the first time and I got a weird result after running the `makeSequenceTable` function. I got only 10,000 reads mapped to the detected ASVs (`sum(seqtab…
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Hi,
I am trying to use:
errR
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During our May test run, collab filtering was successful in the search phase in our own container, but failed during the subsequent scoring step.
Logs from the test run show that it was failing a…