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Hi @ilogue,
I am trying to run the code as follows, but am unable to do so. Here is a sample of how I am trying to do it:
```
from glmdenoise import GLMdenoise
from dipy.io.image import load_nif…
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From [Common principles](https://github.com/bids-standard/bids-specification/blob/v1.3.0/src/02-common-principles.md):
> Example 2: Multiple runs and recs with same acquisition (acq) parameters
> …
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### Description
Looks like motion correction is being killed by the "watcher" process. Apologies if that's not the right terminology- I'm not sure how that works.
### Steps to Reproduce
SCT 4…
baxpr updated
2 years ago
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I download the nightly build from [here](https://sourceforge.net/projects/itk-snap/files/itk-snap/Nightly/), extract it and got "itksnap-4.0.0-alpha.2-20220118-Linux-gcc64".
When I load a test DICOM …
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I haven't done anything near a complete inventory of where metadata is loaded in QSIPrep, but in at least one location ([`get_metadata_for_nifti`](https://github.com/PennLINC/qsiprep/blob/527ef590f1c2…
tsalo updated
1 month ago
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Dear Developers,
Thank you for providing this very useful package. While trying coldcuts with my own segmentation files, I noticed that the `"MNI152" reference space` defined in `seg_draw()` is dif…
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here is the code
> have.fsl()
[1] TRUE
> getOption("fsl.path")
[1] "C:/Users/Asus/FSL/FSLVm7_64.vmwarevm"
> #options(fsl.path = "C:/Users/Asus/FSL/FSLVm7_64.vmwarevm")
> setwd("/Users/Asus/Deskt…
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Had some issues when downloading the data:
Had to add double quotes around file names to make it run: probably because I am using `zsh` as my shell.
Note that this may make it hard for windows u…
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https://github.com/nipy/nipype/blob/ecd5871b64159e02d81af28ecc710b508b7960be/nipype/interfaces/fsl/dti.py#L440-L444
The current documentation for bedpostx shows several input variables being set (e…
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First, some background:
Last year, I started a new project called OpenJData (http://openjdata.org, https://openjdata.org/wiki/), with a goal to create a simple and extensible data-annotation standa…
fangq updated
4 years ago