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[here](https://hutchdatascience.org/FH_WDL101_Cromwell/using-shiny-to-manage-workflows.html#validate-a-workflow) (the 'validate a workflow' section) it says "It does not perform a “dry run” or check …
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After running a large workflow on GCS with ~2,500 tasks, rather than the workflow transitioning from running to success, I received the following error:
```
"status": "Failed",
"failures": [
…
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I have a program that wants me to input a fairly large list of files. So far I've been doing this but literally listing them out in array format (Ex: Array[File] files = ["a.fna", "b.fna", "c.fna", "d…
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Hi Mike,
One _external_ feature we're looking to implement in the upcoming DSP hackathon is collection of runtime monitoring data from individual tasks in WDL. The metrics would be reported from ea…
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## Background
The Task Execution System API is a system to provide a method to quickly run [Docker based tasks](https://github.com/ga4gh/task-execution-schemas). It provides a low level foundation th…
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Dear @mlin,
Thanks for your great work so far. I have been thinking myself about combining miniwdl and snakemake this summer and see if I can make a WDL runtime. But now it turns out you also start…
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Hi,
I have run a WDL pipeline that failed because the docker image URL was wrong.
In this case, for some reason, the tasks that are written in the CosmosDB point to nonexisting stdout/stderr f…
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Hello miniwdl team,
I was wondering if there have been discussions around the implementation of inferring secondary/accessory files based on file inputs, similar to CWL's `secondaryFiles` option. E…
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I want to only output command lines in shell script , Is there any way that i can implement this?
Thank you
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Currently, Optimus and SS2 pipeline tests are both run irrespectively of whether the relevant code has been updated. This ticket is for separating the tests and getting them to trigger independently d…