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Short output from shell:
```
➜ development git:(master) vagrant package
==> default: Attempting graceful shutdown of VM...
==> default: Waiting for the VMX process to go away...
No valid IDs were gi…
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Hi, I'm using SNPrelate to calculate IBS values for all pairs of individuals from my vcf sample. However, I am unable to include sample ids or even export the results in text format. Is there a way to…
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Hi !
I am creating hole arrays with gdspy.
this is how I do it:
```
def hole_array(pos,diameter,period,Nx,Ny,name,layer_number, fill = True):
"""
Creates a hole array (reference)
…
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This issue is to track issues found while others are working their way through the tutorial.
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## Description
Hiya. I am changed from `server 3.5.8-1` to `server 3.5.15`.
`neo4j start` runs fine. I can even create and delete objects in the `cypher-shell`.
However, when I navigate my bro…
ghost updated
4 years ago
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Hello, I'm new to manipulation of hic data and am trying to extract dense matrices from a hic file, and the dump command fails:
>java -jar juicer/scripts/juicer_tools.jar dump -d observed KR GSE80…
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`sexy_markers` works on:
- [x] DArT Silico genotypes
- [x] DArT Silico counts
- [x] DArT counts
- [x] DArT genotypes 1row
- [x] DArT genotypes 2rows
- [x] DArT VCF
- [x] VCF with read and allel…
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Hi my name is John and I am also a PhD student looking to write a new HDL borrowing ideas from Rust and Clash and I was wondering about the nature of your project.
So if I am understanding it right…
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## Goals:
- [x] Make the BPG codebase much easier for users to read and understand
- [x] Separate different aspects of the code into plugins to maximize modularity and reduce issues with interaction…
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I am trying to convert a VCF file to bayescan format using R 3.5.2 on Ubuntu. The VCF was generated using QCTOOL by converting a GEN file to VCF. The conversion works up until right after "Scanning fo…