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Currently all branches in the tree with equal depth have equal length. This should not be the case, as they should reflect cell division times. This will involve:
1. Calculating division times and cre…
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1) Pre calculated global tree, with assigned lineage highlighted (microreact?)
2) Tree drawn on demand for the assigned lineage (phylocanvas?)
We could also do something like:
Find k nearest neig…
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Hi Gerry,
thank you for this very useful tool that accounts for the different confounding factors and errors when dealing with the comparison of gene sets between species and lineages.
I underst…
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The app must renamed as AcSTbUNcA. "Advanced control Some Times but Usually Not control Application".
I'm not a developer to help on this, but usually as pressing buttons like a monkey and installi…
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Currently, the pipeline uses NCBI's `rankedlineage.dmp` taxdump file for taxonomic standardisation, which only has the ranks `kingdom`, `phylum`, `class`, `order`, `family`, `genus` and `species`. How…
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Nav bar should display lineage when chapter is selected
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## Description
When manual starting the lineage enabled pyspark pipeline, got an Py4JError. The same issue also is found in 1.7.0 release.
```
2024/10/25 19:43:36 INFO PythonPipeline: STARTED: Pyth…
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Sentry trace does not show details for open lineage API. Other API shows breakdown for each DAOs, but OpenLineage API only shows the high level performance but no breakdown.
fm100 updated
11 months ago
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It has been three days and it still isn't out, but the build is out for oneplus3. I remember when the first lineageos 15.1 build came for oneplus2 it was added to the lineage for microg builds almost …
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Hi, it would be great if latex commands could be parsed in bibtex file titles (and maybe other fields too).
My use case is species names.
An example of a citation in bibtex format, autogenerated b…