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This would be really great. Nice feature addition for new Escher contributors :)
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Hi I have maps in xml format, which can be used for the cellDesigner, are there methods to change it into json format?
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COBRApy now supports this, but we'll have to check if that info is available in the JSON
suggested by reviewer no. 2
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Would be nice as a default to avoid flux loops.
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https://beta.observablehq.com/@zakandrewking/escher
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The direction of a reaction is somehow arbitrarily defined in the model.
(`A B` vs `B A`)
When loading csv data sometimes model directions do not fit with the data.
Would be nice to have an option t…
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From a conversation on the xtUML Community hangout:
pyxtuml has an OAL parser that replicates the functionality of the BridgePoint prebuilder. Levi and I have looked at this (again) recently. It …
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Hey @ all,
**System information**
- Have I written custom code (as opposed to using a stock example script provided in TensorFlow): yes
- OS Platform and Distribution (e.g., Linux Ubuntu 16.04)…
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Hi @zakandrewking ,
I was wondering if it was possible to implement a way for Escher to wrap around a model object in cobrapy or cameo, such that if one makes changes to the model, they are reflect…
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I used KeggTranslator to convert a KGML file to SBML_L3V1. Then am using the EscherConverter to convert it to JSON map file to put into Escher. However, when I load the converted map to Escher, the ar…