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@spolavar says:
Trying to create owl file from two step process
step#1:
obo to owl conversion:
> java -jar robot.jar annotate --input NCBI_NMOsp_v1.2.obo --ontology-iri "http://neuromorpho.org/neur…
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Alan: Can u verify the following?
The file accessible at http://purl.obolibary.org/obo/ncro.owl needs to be a stand-alone one, merging all relevant individual owl files into a single owl file. Otherw…
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Following on from a discussion with Tanya and Antonia....
The APC is inhibited by various CDC20/fizzy family inhibitors at various cell cycle phases (not clear cut, sometimes overlapping).
Our first…
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Some EC numbers correspond to more than one GO term. I
have examined the cases where this occurs and have the
following recommendations:
EC:1.1.1.1 - alcohol dehydrogenase activity
%alcohol dehydro…
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Hi all,
This is part of the clean-up of 'sensu Saccharomyces' and 'sensu
Fungi' terms. These are pairs of terms where the term string is
identical except for 'sensu Saccharomyces' or 'sensu Fungi',…
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Trying to create owl file from two step process
step#1:
obo to owl conversion:
> java -jar robot.jar annotate --input NCBI_NMOsp_v1.2.obo --ontology-iri "http://neuromorpho.org/neuroMorpho/ontologie…
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1.
should GO:0000128: flocculation
be a child of
cell-cell adhesion (not just 'adhesion') ?
2.
agglutination GO:0000771 needs parent conjugation
GO:000074 (the child terms appear to have appropri…
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This term does not seem right at all. I think it is a
cse of getting carried away with standardized
definitions. I have never heard of a GMC in vertebrate
embryos. I also don't think that in vertebrat…
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We are in contact with John van Dam, Toby Gibson and colleagues to add/revise terms related to cilia (CC and BP). Here is a first list of suggested edits from John:
"...In the end I've removed a lot …
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I am submitting an obo formatted file of the revision of the
immunology and response and detection terms (file is zipped). This is
close to the final form of the revision, and I invite all interest…