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**Attach your log file**
```
2021-03-25 09:08:07 : ERROR Found in .computeLSI for
LogFile = ArchRLogs/ArchR-addIterativeLSI-b2038219887-Date-2021-03-25_Time-09-07-57.log
```
**Describe th…
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I get an error when running Motif and Feature Enrichment with ArchR. I am using R version 4. The package S4Vectors is installed, but I still get the error:
proj
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Hi,
With reference to Chapter 11.3 in the full ArchR manual and the script:
markerTest
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Hi
When I use 10X data to create an arrow file, I receive the following error
`
-
**Attach your log file**
[ArchR-addReproduciblePeakSet-ef5e40415715-Date-2021-01-14_Time-12-24-41.log](https://github.com/GreenleafLab/ArchR/files/5814697/ArchR-addReproduciblePeakSet-ef5e40415715-…
-
Running the function:
```
ArrowFiles sessionInfo()
R version 4.0.4 (2021-02-15)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.7
Matrix products: default
BL…
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I have used ArchR to perform clustering of cells from scATAC-seq data obtained from the 10X Genomics platform. I was wondering how I might be able to retrieve the IDs (barcodes) of the cells that make…
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archr fails to generate the trace for some CGC binaries using their PoVs. The traceback is something like this:
```python
Traceback (most recent call last):
File "archr-repro.py", line 17, in
…
-
I get the error when I ran Unconstrained Integration:
```
archr_obj
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**Describe the problem that your feature request would address.**
Jeff Vierstra has generated a nice resource for clustered motif models and motif "Archetypes" here: https://www.vierstra.org/resource…