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Hello,
Following `conda install -c conda-forge pims` and `conda install jpype1 -c conda-forge`, I can `import pims` (Python 3.8), but the module is empty. i.e. none of the functions show up in the V…
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Hi I am picking up the following error each time I try to run CellProfiler headlessly on HPC. Its really driving me up the wall and would really appreciate your advice.
Thank you very much.
Regar…
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Vanderbilt TMC's next data release's incoming processed microscopy images are bioformats' `xmlvalid` (docs [here](https://docs.openmicroscopy.org/bio-formats/6.5.1/users/comlinetools/xml-validation.h…
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Hi, I'm trying to analyze cytoplasmic flow in my mouse oocyte images (timelapse) following the tutorial.
However, when I import multipage TIFF or ome.tif files containing multiple frames, I get Valu…
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Hello John.
I have 3 RGB images i have merged in the color channel. It should be possible to save it as a 9 channel image.
However, when i save it and reload it, it only saves the first 3 channels.
…
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## TurboGears 2.2.2
This is the second upgrade in the process. If you have any questions, tag @amilworks on here.
**Current Version**: `TurboGears2==2.2.0`
**Upgrade Version**: `TurboGears2==2.2.2`…
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Hi,
I know there was such as issue described here already: https://github.com/qupath/qupath/issues/287
But I wanted to point out that with the latest 0.3.0-SNAPSHOT, the memoization file got sa…
lacan updated
3 years ago
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We are getting a set of warnings (which I think is contributing to a subsequent error https://github.com/Dana-Farber-AIOS/pathml/issues/164#issuecomment-953384867 and the warnings https://github.com/D…
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Having trouble installing.
Specifically, in the python-javabridge dependency.
```
Collecting python-javabridge==4.0.0
Downloading python-javabridge-4.0.0.tar.gz (1.3 MB)
ERROR: Comman…
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I've been forwarded https://forum.image.sc/t/abberior-files-slow-to-open/51273
which pointed out that the OBF reader takes a very long time in `OMEXMLServiceImpl.validateOMEXML` mostly in `java.net.S…