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Get a small error window with "Bad file descriptor". GDB is of no use. Clean build.
Edit: Crashes even before reaching `int main (int cmdline_argc, char** cmdline_argv)`
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Cryptic title to basically describe this: when looking at a slice, then changing the slice direction (e.g. from axial to sagittal by pressing 's'), then hitting escape to min-max window... it uses the…
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I am confused with the bvalue_scaling option that comes with mrconvert, e.g. as in:
mrconvert -bvalue_scaling true DICOM dwi.mif
This does not result in a dwi.mif file with scaled b-values.
I vaguel…
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To install mrtrix3 on our server, I had a look at the package_mrtrix script. I launched an Ubuntu 14.04 VM locally, pulled the master, built without the GUI, and ran `./package_mrtrix -standalone`, as…
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import nipype
Error message:
``` python
Traceback (most recent call last):
File "", line 1, in
File "/home/applications/python/2.7.5/lib/python2.7/site-packages/nipype/__init__.py", line 77, in …
tsalo updated
9 years ago
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Hi, I was trying to run the HCP demostration as outlined here: https://github.com/MRtrix3/mrtrix3/wiki/ISMRM2015-HCP-demonstration
Everything worked until the connectome generation.
tckgen output:
t…
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Just encountered a strange bug. I opened a NIfTI image in mrview, and switched to volume render. Suddenly the intensities shown where much darker (as in: lower on the colour scale), but the colour b…
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Both on (latest) master branch, as well as on updated syntax branch. As originally reported by @dchristiaens in https://github.com/MRtrix3/mrtrix3/pull/225#issuecomment-153653893 .
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- [x] L1 - in-vivo textit (@daducci)
- [x] L19 -CSF- or (CSF). Conflicting comments from @asantos5 and @ecaruyer .
- [x] L13 drawn / generated (@daducci)
- [x] L14 The diffantom -> Diffantom (@ecaruye…
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Jonathan called this a "topup" correction. I have no idea what he meant, but I suppose mrtrix can take into account two images.