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Hi, I have been trying to do an sentiment analysis on twitter data using sswe. However, as each epoch is passing, the error value is continuously increasing and accuracy always remains 0. Can someone …
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It is `bids-statsmodels-design-synthesizer` but `aggregate_stats_design.py` (should not have `.py` since should not be relevant for CLI) ... I wonder if could be anything shorter:
- in principle A…
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first thoughts on how to do updates:
-re-run functional annotation pipeline
-copy new functional annotation directory to analysis folder (preferrably on apollo-stage, otherwise CERES)
-re-run final…
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With programs like Seurat and Scanpy + scirpy, we visualize the gene expression and VDJ data. I am wondering what output files from Trust4 can be used for the same purpose. Do we need to create the a …
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One think that has been requested is to enhance the final_table.tsv file to include (apart from the columns it already includes), the NCBI Taxon ID for each ASV/OTU and the accession number of the seq…
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This is a different issue than the other I posted.
Now I can easily run CPAC GUI using singularity without problems. However, when I try to save the BIDS formatted dataset I have, it gives me the f…
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I've implemented a function that produces Tcl dictionary output from jq (see [man n tcl](https://developer.apple.com/library/mac/documentation/Darwin/Reference/ManPages/mann/Tcl.ntcl.html) for an over…
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Hi everyone,
I am working with an ASV table from dada2 output in R. I did some data wrangling to make a 'taxonomy' column as similar as I could to the example asv table provided. I also changed 'AS…
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Continuation of #1 by @LuckyMD :
> Another aspect, I haven't touched yet is whether we can have the metrics output a tsv file instead of an AnnData object? We could then concatenate all individual …
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@milanvarady This is somethings we can look into after the release of 1.0.0.
Maybe during version 1.2.0 or 1.3.0.
![Rename_Panel-01](https://github.com/TheAcharya/MarkerData/assets/118706051/64…