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The code in tumor_segmentation/main.py (https://github.com/neuropoly/ivado-medical-imaging/blob/al/tumor_segmentation_UNet2D/tumor_segmentation/main.py) is essentially the same as ivadomed/main.py (ht…
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hi,
i found that in the interpolated scan of case 00015, the mask label 1 signifying kidney is extending eyond the kidney region, please see the image below
is this label correct
thanks…
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It would be great if some documentation could be provided for how to load a stack of dicoms or a .nii file alongside a segmentation (.nii) and output a cropped n-dimensional array with padding ready f…
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Hi,
I created a casper object from 10X data using:
object
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hello,
Is there a difference between Kidney Segmentation and Kidney Tumor Segmentation?
Why does Kidney Tumor Segmentation have no results?
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**Describe the bug**
After click the "Geodesic Training Segmentation" and wait for a few seconds, an error prompt out "The physical dimensions of the previously loaded image and the mask are inconsis…
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I am breaking up #27 into more focused issues.
#### What are the scientific goals of the analysis?
Integrated analysis of CNV and structural variant data. This issue covers readouts/output d…
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Would it be possible to update the read_InFormImmunoProfileV1 function to avoid calculating NN, edge and contact maps to improve the loading time?
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OSError: [Errno 28] No space left on device
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This is a log file. I don't know why I got the error message for only one sample of over 1000 samples.
Please check the below error message.
INFO [2019-12-26 10:42:52] -------------------------…