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MCMC sampling, while having worked so far, does have a number of drawbacks. We should test some of the other sampling methods implemented in Python, if only to see if they are viable.
To begin, we …
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Hi,
I have written my model in jax which is functional by itself when run outside the Numpyro implementation. But it fails when I try to pass that as a `model` in numpyro the usual way. I use a wra…
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At the moment, we either do one of the following:
1. Initialise all chains at non-random points
2. Randomly sample a starting value from some distribution, then pass these values to the MCMC sampl…
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**Submitting author:** @mparno (Matthew Parno)
**Repository:** https://bitbucket.org/mituq/muq2.git
**Version:** 0.4.1
**Editor:** @pdebuyl
**Reviewers:** @martinmodrak, @georgiastuart
**Archive:*…
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Hi
When I run the example **pymc/pymc/examples/latent_occupancy.py**, the following exception occurs:
```
/home/yangky11/room502B/graphicalModel/example.py in ()
52
53 # Latent variab…
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The `greedy_caller` function is used to find an initial genotype for the `CallingMCMC.fit()` method.
In version 0.5.0 the `greedy_caller` function is hard-coded to use int8 which results in an overfl…
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Hi, thanks for developing such an amazing toolbox. So far, I successfully run the example (https://carter-allen.github.io/stxBrain_all_maple.html ). But, I have a question about the option of 'fit_map…
zqsha updated
2 years ago
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We overlooked the possibility that different groups might have different numbers of subjects and `CRP_sampler` assumes they are the same without checking. The MCMC can be built and run but runs incorr…
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Pass the [default values for the NUTS constructor](https://turing.ml/dev/docs/library/#Turing.Inference.NUTS) explicitly:
```
using Test
# Import Turing and Distributions.
using Turing, Distribu…
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**General information:**
- emcee version: emcee-3.1.0
- platform: Ubuntu 20.04 lts
- installation method (pip/conda/source/other?): conda
**Problem description:**
### Expected behavior: sam…