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When performing a Variant search I get the following error message.
File \"/seqr/seqr/utils/elasticsearch/utils.py\" line 54, in get_index_metadata\n field: field_props.get('type') for field, f…
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**Describe the bug**
Search across multiple projects won't go through
**Link to page(s) where bug is occurring**
https://seqr.broadinstitute.org/variant_search/results/f27c098f672d5929af6de26581a…
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gtiao updated
3 years ago
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Any new edits in the Internal Notes and Internal Summary fields are not being saved.
https://seqr.broadinstitute.org/project/R0384_rare_genomes_project_gen/case_review
Appears to be impacting an…
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**Describe the bug**
In the variant search under "Location" I tried adding a list of variants. I tried different formats to search for several variants at once but the search returned 0 results (but …
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**Describe the bug**
Unable to perform a search
**Link to page(s) where bug is occurring**
https://seqr.broadinstitute.org/variant_search/results/252f6d253af72d60d5e5b338e4868973?page=1&sort=path…
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When uploading new individuals, a pedigree is not being automatically drawn on the family page the way it typically is. An error message pops up when the new individuals are added, but it does allow t…
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**Describe the solution you'd like**
It would be very useful to add links to ClinVar and HGMD to the gene page.
**Additional context**
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Greetings. With a file docker-compose.yml in place, and python 3.8.1 / docker compose in path, I follow these steps:
sudo docker-compose up -d seqr
sudo /usr/local/docker-compose/docker-compose u…
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Hello,
I have annotated and loaded a VCF file. I have imported the dataset in Seqr. This worked without any issue.
Then, when I click on 'Variant Search', even if I put no criteria, I have this …