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$ for file in /local/scratch/disk2/research/NENAH_BIDS/derivatives/preprocessing_logs/*NENAH0*; do echo -e "\n\n --------------------------------- \n\n `basename $file` \n"; cat $file/*mriqc*; done
…
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### Library Version
4.23.1 (and earlier)
### OS
Windows
### OS Architecture
64 bit
### How to reproduce?
1. Created a parquet file in Python (this could already be the source of the issue). Se…
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**Describe the bug**
Using `dcm2niix -z y` produced a .nii file, not .nii.gz as expected.
**To reproduce**
Steps to reproduce the behavior:
1. Run the command `dcm2niix -o $output -f my-pref…
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**Submitting author:** @orbeckst (Oliver Beckstein)
**Repository:** https://github.com/alchemistry/alchemlyb
**Branch with paper.md** (empty if default branch): 71-joss-paper
**Version:** 2.3.0
**Edit…
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pkg/server/application_api/application_api_test.TestAdminAPITableStats [failed](https://tanzanite.cluster.engflow.com/invocations/default/81478bbf-f174-445b-8965-56fe30a0a90e?testReportRun=12&testRepo…
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It appears that the Coursera folk have changed where you access the videos again. It appears that it can login ok, but it finds "0 sections and 0 lectures". I tried both with the netrc and with expl…
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قیمت تعدیل شده و قیمت تعدیل نشده در دانلود تاریخچه یکسان است.
![image](https://github.c…
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Hi, I'm trying to use the MANTiS tool. But I am having issue with the Watershed segmentation of CSF. I am putting the code generated below:
04-Oct-2023 15:56:57 - Running 'Watershed segmentation …
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When I try to use this module I get the following error
```
24.04.02 22:06:45 Instance/Wrapper/onvif: Error connecting to 192.168.1.8: Error: connect ECONNREFUSED 192.168.1.8:80
24.04.02 22:06:45 I…
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Hi, I posted my question at
https://www.biostars.org/p/208171/ , but think I have better chance of an answer here.
I am trying the hisat2 -> stringtie -> ballgown workflow. I have 46 samples from 2 t…