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Agrovoc contains many concepts of interest, and portions could even be imported directly.
Naive search for concepts involving 'food' as either label syn or appearing in def (using https://github.com/…
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It is often the case that the strong Si I 1082.7 nm line is observed along with the He I 1083 nm line. The line core forms in the NLTE condition as discussed in several papers but nevertheless it is o…
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Hi!
I am trying to use this package to remove as much contaminants as I can from an already cross contaminated samples.
For context, this data comes from NovaSeq sequencing, so I am working with E…
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Hi, I am trying to use octopus for liquid biopsy samples. In this context I have deep (10,000x) targeted (~1.3Mb Panel) sequencing data which are preprocessed by deduplication and bqsr (gatk). So cove…
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Hey everyone, I am testing your tool to check for contamination on my scRNAseq+CITEseq experiment. I have one issue and some questions:
1. When running the pipeline on all the features and antibody, …
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### Description of feature
The following QC parameters need to be set for AMR targets, tests should be added as well.
klebsiella {
search = "Klebsiella"
raw_average_q…
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This is a placeholder to discuss what we are doing in terms of Quality control of BBS data
## Plant and Food Research
We have some `perl` scripts, `knitr` Rmarkdown scripts, and a `shiny` application…
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Microbes Persist has 105 samples but only 103 metagenomes. Doesn't seem to be any other omic data associated (at least based on the portal). Are there 2 samples with no omic data?
https://data.micr…
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### Responses to the uses task can be scored in four ways: originality, fluency, flexibility, and elaboration.
- **Originality** - each response is compared to the total amount of responses from al…
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In #35 the discussion was mainly about how we format the body of closures. Currently rustfmt uses visual indent when we need to use multiple lines for closure's arguments:
```rust
fn examples() {
…