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**Submitting author:** @pitmonticone (Pietro Monticone)
**Repository:** https://github.com/JuliaGraphs/MultilayerGraphs.jl
**Branch with paper.md** (empty if default branch): JOSS
**Version:** 1.1.4
*…
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At the stage of finding neighbors, my jupyter kept showing this error:
the error:
```
OMP: Info #276: omp_set_nested routine deprecated, please use omp_set_max_active_levels instead.
And it …
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### Please make sure these conditions are met
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the latest version of scanpy.
- [X] (option…
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A broken dependency for igraph is preventing me from installing many R libraries which depend on igraph.
I attempted to install with `install.packages()` and with devtools, both failed in same mann…
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Many thanks for the code.
I was able to run the training.py script using just one network in the adjacency matrix. However, when I try to use multiple networks, I get the following error. I tried i…
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sc.tl.leiden(adata,use_weights=False) ERROR
![image](https://user-images.githubusercontent.com/39158528/192767636-991ed282-cf6c-46be-841f-389007976b16.png)
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**Describe the bug**
When plotting a graph inside a matplotlib axis, the `vertex_label_color` stays black no matter what.
**To reproduce**
```
import igraph as ig
import matplotlib.pyplot as pl…
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Hi,
Thanks for providing an amazing platform for single-cell data analysis.
I was trying to use palantir in scanpy and I just reran the example data. However,
d = sce.tl.palantir(adata)
always …
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I want to print a decision tree, that looks like that: https://images.app.goo.gl/YQVE6zhGQA884KcVA
This is my code:
def main():
vertex_text =['1000\n\nBasis',
'1243\n\nModifikation Eins',
…
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**Describe the bug**
I am having the trouble to install scenic+, although I have spent a considerable amount of time trying to do so. I would greatly appreciate it if you could provide any solutions …