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More and more people are asking for the ability to modify the svg template of the glass brain. For example, Pasteur's people want to plot ferret brains. I suggest that we may be able to set a global v…
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The `VideoMaker` class is a bit buggy. Some actors (e.g. cells) are not rendered in the video frames.
This is probably because in `brainrender.scene` the vtkplotter plotter is populated with `show(*…
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I'm not sure where to start looking for the error. I've already resolved some symlink issues that might be surfing again.
> Running qsiprep version 0+unknown:
>
> * BIDS dataset path:…
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The code in tumor_segmentation/main.py (https://github.com/neuropoly/ivado-medical-imaging/blob/al/tumor_segmentation_UNet2D/tumor_segmentation/main.py) is essentially the same as ivadomed/main.py (ht…
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Is there a way I could change the Imaging Plane / View Mode for a CT, in order to achieve something like this: https://fnndsc.github.io/ami/#viewers_quadview?
I need to be able to change the plane be…
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Dear Experts,
I am converting DMRI DICOM files from Siemens Prisma using the most recent version of dcm2niix.
Specifications for orientations in Scanner is as below:
Sagittal (X) Right to Left
…
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Hi,
while I was trying to debug some issues regarding a DTI from Philips, I noticed the function `siemensPhilipsCorrectBvecs`. As far as I can tell, this correction/tranformation is based on the or…
dagra updated
4 years ago
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Hi @TinasheMTapera ,
I have solidified the heuristic that auto-populates keys per our goal.
It looks like there's a variable in the code `convert_to_bids` that doesn't recognize `items` within …
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Hi,
I'm currently reprogramming the viewer for our version. Basically, I reallocate the surface viewer (lowerImageBot2) to make it bigger as shown in the figure.
![Capture](https://user-images.git…