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Not sure if I should check the references to see if this reaction should be reversible or if we can assume that it is reversible and remove the irreversible one, like nearly all NAD(H)-dependent react…
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Condition: Systemic Lupus
URL : https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8325587/
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Hi dear developers,
# Basic information
My operating system: Intel(R) Core(TM) i7-8750H CPU @ 2.20GHz 2.21 GHz, 16.0 GB (15.8 GB usable)
### (ms2query) amissinou@REN-1349-A104$ ls -l
drwxrwxr…
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Hi,
I was hoping to use the `read_eggnog_mapper` function of this package. I downloaded the humann2 "utility_mapping" database, but I can't find this file (L18 of the function's source code): ` F =…
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In the biweekly call today, we discussed creating a JSON file per pathway with identifier mappings. For example, we could have a JSON file WP1-identifiers.json in the [WP1 folder](https://github.com/w…
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In [`18d8042`](https://github.com/Sulstice/Uptime-Cheminformatics/commit/18d80425d8d02a4c9ffcfede0cf7e610b6820929
), Metabolites Biological Role (http://csbg.cnb.csic.es/mbrole2/) was **down**:
- HTTP…
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We need more folks to go through the interactive training material we prepared to:
1. Become a pathway editor, or
2. Provide feedback on the system, or
3. Propose new training elements, or
4. I…
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Hello Cecilia,
I am having an issue with a custom database where I got the following message:
```
Error in run_mimosa2("configuration_table.txt", make_plots = T, save_plots = T, :
Unfortun…
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Suggestion from Curators meeting (Freddie):
[paraphrased]
"The Academy doesn't describe explicitly how to transcribe a statement (sentence) in a paper or other source into a reaction in WikiPathwa…
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Comme discuté ensemble au téléphone et après avoir rebouclé avec Floriant : il faudrait créer un nouveau fichier de sortie exclusivement pour les ACP, qui ne serait pas diffusé aux demandeurs. Il s'ap…