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I just cloned the master branch for the 0.3 version and tested a strange behavior from csdeconv in mrtrix 0.2
From my understanding, mrtrix always use the information from the affine matrix at every …
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This is needed to account for the different coordinate system used by flirt - see [discussion on Google+](https://plus.google.com/108401659717037510983/posts/bNN9fj3zHMH) for details.
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Not sure if this is an MRtrix issue or FSL issue, but FSL is struggling with nii files converted using mrconvert, throwing an error "inconsistent sform and qform information in file".
It worked fine w…
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As mentioned by Romain Valabregue on the MRtrix mailing list, the ordering is not preserved for certain operations. For example:
```
mrinfo data_B2000.nii
Data strides: [ -1 2 3 4 ]
dwi2tens…
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This is despite the presence of optimisations in MRtrix 0.3 that are not present in 0.2.
Also: iFOD1 is slower than iFOD2 in 0.3.
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Currently, the DICOM import code will scale the b-value by the squared amplitude of the DW gradient. This is to allow correct interpretation of the DW scheme when using custom multi-shell diffusion en…
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Current implementation will search for files called bvecs/bvals co-located with the DWI data, and use them if found. Otherwise, it'll look for files with the same prefix as the DWI image and the _bvec…
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Today I've done a pull of the mrtrix3 repository. When I do ./build I've got this error:
ERROR: [CC] src/gui/mrview/mode/volume.o
g++ -c -fPIC -march=native -DMRTRIX_WORD64 -DMRTRIX_USE_TR1 -Wall -W…
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`mrconvert` with the `-coord` option is often used to extract a single volume from a 4D image series. In this case one is left with a 4D image, where the dimension of the fourth axis is 1. Am wonderin…
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I've just built mrtrix3 on CentOS 6 and get the following error when launching mrview:
GLSL log [vertex shader]: 0:1(10): error: GLSL 3.30 is not supported. Supported versions are: 1.10, and 1.20
mr…