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Hello,
I tried to run the new version of vsearch with sintax on a computing cluster, but the processing was extremely slow despite the large amount of computing resources requested (4775 MB per cor…
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Hi,
I have ASVs across a set of samples- can I run these through lotus 2 lambda using the taxOnly flag?
My guess is I need to create a fasta from the ASVs but then I wont have any quality score…
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### What happened?
Clicking the "Benchmarked by ASV" Badge leads to a broken URl
https://pandas.pydata.org/speed/xarray/
### What did you expect to happen?
_No response_
### Minimal Compl…
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Dear Amy Sweeny,
I read your great paper ... Please you can help me to fit a model.
I have this variables:
asv : DADA2 output
treat : 3 differents (class1, class2, class3)
time : 3 diff…
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Hi Vuthuyduong,
I have followed your pipeline for the classification of some ASVs. My reads are ITS1 extracted, and I’ve used the ITS1 extracted UNITE v10 database that you prepared (thank you!). H…
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Hi,
Im looking to get consistent results per samples such that sample X in cohort A will have the same results as the same sample X in cohort B.
I have previously run dada2 (stand alone) on coho…
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https://github.com/man-group/ArcticDB/actions/runs/9300495907/job/25596708636
https://github.com/man-group/ArcticDB/actions/runs/9288017741/job/25558505873?pr=1584
```
Traceback (m…
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While running `asv run master^! -j | tee asv-output.txt` on https://github.com/tardis-sn/tardis, I am getting an error:
```
asv run master^! --skip-existing-successful -j | tee asv-output.txt
Tr…
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**Is your feature request related to a use case or problem? Please describe.**
[PR3822](https://github.com/quantumlib/Cirq/pull/3822) adds performance benchmarks for ASV to solve #1124 . Create a s…
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## Motivation
If any algorithmic improvements are to be made to KDA we will need some type of formal testing that includes both time-based tests and memory-based tests.
Previously with KDA I ha…