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Many APIs haven't been updated since first creation. For example, https://biothings.ncats.io/go_bp, https://biothings.ncats.io/go_cc, and https://biothings.ncats.io/go_mf haven't been updated since 20…
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We created an API for SuppKG in https://github.com/biothings/pending.api/issues/55 and https://github.com/biothings/biothings_explorer/issues/706. We previously [noted](https://github.com/biothings/pe…
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Similar to other BioThings APIs, such as MyGene.info, we can create OpenAPI-based MyGeneset.info API metadata and register it at the SmartAPI registry (https://smart-api.info).
By adding `x-bte` a…
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To incorporate the PharmGKB API as described in https://github.com/biothings/BioThings_Explorer_TRAPI/issues/556, we need node normalizer to resolve PharmGKB identifiers for genes, diseases, variants,…
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API URL: https://biothings.ncats.io/text_mining_targeted_association
Parser GitHub URL: https://github.com/UCDenver-ccp/text_mining_targeted_association
Git branch/commit: Master 969da7c
No. Docume…
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I suggest changing the FOODON IDs to be numeric (remove the FOODON_ part of the ID).
Biolink-model folks have told us to use the BioRegistry regex strings for ID-format, and [BioRegistry shows th…
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The [if-elseif logic for api-response-transform](https://github.com/biothings/api-respone-transform.js/blob/d6723f5164f039ba427e6408a5afd1438e244435/src/index.ts#L25) seems somewhat confusing, obsolet…
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Opening an issue here to better track the status of this effort. In the future, when data resources reach the x-bte annotation part, we'll want to open an issue in this repo for tracking.
Previous…
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Right now WF2's setup requires the MyGene client, and drawing the MyGene client from PyPI gives you a blank MyGene object which makes the code fail to import the module.
It seems like that the team…
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API URL: https://biothings.ncats.io/multiomics_drug_approvals_kp
Github URL: https://github.com/multiomicsKP/drug_approvals_kp
Git branch/commit: https://github.com/multiomicsKP/drug_approvals_kp/co…