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I am currently working on this - can't assign myself this issue for some reason.
Breakdown:
1. Script for updating synapse tables when data changes
2. Add GitHub action to run that script and up…
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Elsewhere in Bridge2AI there have been efforts to develop metadata standards based on Healthsheets: see https://dl.acm.org/doi/fullHtml/10.1145/3531146.3533239 for the original guidelines.
It would…
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The last couple of new entity request issues have been failing in GH Actions:
```
Run poetry run python ./.github/scripts/process_issue.py --github
Traceback (most recent call last):
File "/home…
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Each table build should be accompanied by metadata providing, at minimum, the following:
* The date of build
* Source versions of each ontology (or at least of PHENIO)
* Source versions of each ass…
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Docs: https://matentzn.github.io/monarch-provenance/
Mermaid diagrams are in the source for each docs page but don't appear to be rendering at all.
Example: https://matentzn.github.io/monarch-prov…
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This issue just captures the information shared by the DRC with us via email to help@cfde.cloud. These links were a response to my asking for API access to the information on https://info.cfde.cloud a…
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### What product(s) is this story for?
_No response_
### As a user, I want
_No response_
### Description
Shiny app for the Bridge2AI
### Acceptance criteria
_No response_
### Tasks
_No respon…
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Often it's desirable to generate a data entry form directly from a LinkML schema. We should add a how-to with the different approaches
* Tabular
* [Valve](https://github.com/ontodev/valve.rs)
…
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i believe permissions of `/opt/conda` are off with the python installation in the core `cpu-root` package, but i couldn't determine exactly what as the `Dockerfile` for the root package is not directl…
satra updated
7 months ago
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Starting from an existing schema, the idea is to generate generic instances of an object (in yaml). This won't necessarily conforms to the schema but is a starting point for generating a valid object.…