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Hello, I have been working on structural analysis of an animal and have used a lot of ANTs software. This time, I finally managed to run the `antsCorticalThickness.sh` script through debugging and obt…
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Divide abnormal cortical ventricular zone morphology add new children
abnormal/increased/decreased cortical ventricular zone thickness
PMID:38331934 and existing annotations
abnormal/increased/…
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Hi team,
I'm working with TBI patients at an early time point - there's a lot of structural change such as swelling which makes the affine registration to the SST, even if SST is built with ANTsSyN,…
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@cookpa @ntustison
I am running cortical thickness extraction for Brain MRI images (a batch of 4000 MRI images) and encountered a segmentation fault during processing.
The script ran successful…
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### Operating system and version
Ubuntu 20.04
### CPU architecture
Please select
### ANTs code version
ants-2.5.0
### ANTs installation type
Please select
### Summary of the problem
hi
When …
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Hi,
Thank you for sharing the code and making this project open-source! I am working on replicating the results of your paper, and I noticed that the dataset described in the paper is not provided …
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This is not an issue per se, but more of a discussion for improvement.
I like the dataset fetching part of nilearn, not just the individual functions, but the collection as a whole is helpful in th…
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Hi team,
Should we use "PropogateLabelsThroughMask" on the DKT labels to get an accurate volume? the labels incompletely cover some structures such as caudate in this image. Any other processing nece…
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But otherwise appears right. Is this a bug in how the data file is read?
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ANTs developers,
Is there any way to get surface normal (3D vector indicating the correspondence from WM point to GM point)f for gray matter voxels like FreeSurfer?
In the same way, can we apply…