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Hello @ArtRand
I would like to confirm that the scores obtained in the DMR are indeed calculated based on the last two columns, i.e., pct_a_samples and pct_b_samples.
Specifically, I would also lik…
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Hey, I have (summary) BED files and I wanted to know if I necessarily need the bed file from pileup to run dmr. The samples I have is not compatible with modkit pileup.
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### Question / bug report
Trying to remove DMR on a book i bought on Rakuten. I need to convert it to epub or PDF to view on my ipad.
I followed all this but still not working and Calibre keep tell…
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in simple DMR I still hear the DMR burst when there no talk
same thing in NXDN one frequency.
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I recently read your article titled "Charting differentially methylated regions in cancer with Rocker-meth" published
in Communication Biology, and I found your research both intriguing and highly in…
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@USA-RedDragon Does this repo contains complete DMR Protocol [Data Link and Control] Implementation?
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Hello. Thank you for creating this useful tool! I called mC and hmC bases, aligned the .bam files, sorted and indexed, and then created bed files. Then I wanted to perform modkit dmr pair on my two sa…
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Dear yupenghe,
Is there any change in methylpy 1.4.7 compared to 1.4.6? 1.4.7 generates a lot of files such as dmr_filtered_allc_*-DNA.tsv_5_36.tsv in the folder when I run DMRfind, and dmr_rms_resul…
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Hi,
the solution to this issue is shown at the bottom of this post.
I‘m running MMDVMHost host on a Linux system. It is a server system, AMD Ryzen, 8 code 8 GB RAM, M.2 SDD, …
My STM32F103 …
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Hi,
I want to use defiant to identify DMR in my WGBS data (non-model organism). I used the following command but can not identify any DMR. Please let me know if and how I could relax the conditions …