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**Submitting author:** @tongzhouxu (Tongzhou Xu)
**Repository:** https://github.com/tongzhouxu/mashpit
**Branch with paper.md** (empty if default branch):
**Version:** v0.9.7
**Editor:** @csoneson
**…
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Rolling window quantiles of width w can be calculated on all observations in years leading up to a date of interest.
e.g. we may be interested in 90th ptile of temperature on 23 July 2024. This can…
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Background: This tool is a privacy preserving voluntary COVID-19 self-reporting platform for contact tracing. Users share their (encrypted) location history and test status, get a notification if you …
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https://github.com/cmirzayi/EpiForBioWorkshop
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#### Related to Epidemiology
- [Mining Internet search and social media for epidemiology; Kristin Isaacs et al. (2014)](https://www.accessscience.com/content/article/aYB140427)
- [Epidemiology Cha…
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The [`Pigeons.jl`](https://github.com/Julia-Tempering/Pigeons.jl) package exposes parallel tempering for `Turing` models. PT is considered an effective inference methodology for posterior distribution…
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Hi @dscolby
I work on implementing causal learning in eco-epidemiology, and I recently discovered CausalELM. I see important features in the package, such as the computation of G-computation and the…
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The following epidemiology terms were created earlier on for IDOBRU because IDO Core didn't have the relevant terms.
-infectious disease endemic site (parent of brucellosis endemic site)
-infectious…
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[SamPy](https://www.preprints.org/manuscript/202211.0556/v2) is an agent-based modeling (ABM) simulation toolkit for infectious disease epidemiology. There is some interest from @tpoisot @Beasley015 (…
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We may want to introduce some basic vocabulary very early in the book. This is not a complete appendix, it's just a short review chapter that will get us up to speed. Here is a running list of potenti…