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- Host MaveDB track data on S3.
- On the MaveDB homepage or another suitable place, add a link to the UCSC Genome Browser with this track data.
This is needed to support a Wagner lab publication. We …
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This is because, on the first line of the gbf file, sometimes there is no space between the "chunk" number and the length of the sequence, altering the real sequence length:
E.g:
LOCUS my…
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I have identified discrepancies between the sequences extracted from the `hg38.ml.fa` reference genome using BED file coordinates and those stored in the tfrecords within the Basenji dataset hosted on…
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Hi,
Can anyone give more details how to use MakeHub output with UCSC Genome Browser? I did not find any reported issues regarding this step.
Following **[How to use MakeHub output with UCSC Geno…
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Either Jbrowse, Biodalliance, something else or homegrown browser.
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Can I use my own genome that is not registered in the UCSC Genome Browser?
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We want multiple test datasets to implement and test the population genomics features. Otter will be one of them, as we can refer to a publication that studies the population structure. We need at lea…
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**Is your feature request related to a problem? Please describe.**
For multiple genome comparisons, it is quite hard to find a genome browser that can handle it. I know that JBrowse2 can visualise 2 …
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Sarah found a bug in the genome browser! If you change the location by dragging the browser and then switch to a different species, the species in the URL is not updated, although the location is.
…
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issue: I just noticed (I should have spotted that in previous PR) , that some external links don't open in a new tab.
e.g: http://gigadb.gigasciencejournal.com/dataset/100020
On that page, the lin…