-
#### Summary:
The section on HMMs (under Time-Series models: https://mc-stan.org/docs/stan-users-guide/time-series.html#hmms.section) in the Stan users guide currently doesn't use Stan's dedicated fu…
-
Error message below (bottom):
INFO @ 21 Oct 2024 16:38:48: [107 MB]
# Command line: hmmratac -i BED_files_sorted/9.bedpe -f BEDPE -n macs3_output/9
# Random seed selected as: 10151
# Use --hmm-t…
-
I met a bug that when training HMM, occasionally the initialisation will fail, showing error like this:
```
2024-10-07 15:43:58 INFO osl-dynamics [hmm.py:470:random_state_time_course_initialization]…
-
Hi,
Reading of models built from DNA sequences appears to fail: below I show an example using a motif from the Dfam database ([DF0000029](http://dfam.org/entry/DF0000029)).
```
cp = hmm.HMM.cre…
-
Hi and congrats on the package!
I'm one of the reviewers for the JOSS paper you submitted, so here I'll list my questions and concerns about the documentation. This issue will be updated as my read…
-
-
### HMM
HMM tutorial
https://www.cs.ubc.ca/~murphyk/Software/HMM/rabiner.pdf
Hidden Markov Models Fundamentals
https://cs229.stanford.edu/section/cs229-hmm.pdf
Regime Shifts: Implications for…
-
**Is your feature request related to a problem? Please describe.**
GaussianHMM in sktime currently doesn't support training on multiple sequences individually (panel inputs). While this functionality…
-
https://en.wikipedia.org/wiki/Baum–Welch_algorithm
-
I am trying to fit various HMM classes (LinearRegressionHMM, or GaussianHMM) to my data but it does not let me pass `num_states=1`. For `num_states > 2`, everything works as expected. I wanted to know…