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Hi team
I wonder if you have any advice to the IT team as I will ask them to allow me to use mzmine on the HPC of the university. It is slurm-based [here](https://www.abdn.ac.uk/research/digital-res…
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I've written https://juliahpc.github.io/. Depending on how important you think this "HPC workflow" aspect is, we should probably either integrate some of the content into MJW or at least link to this …
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### Description of the bug
I've run into an issue running the Sarek pipeline with Sea Urchin genome data. I would like to run Manta to find all variants from short read DNA sequencing data. I have al…
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Good day! 😊
Is it currently possible for users to set up a `callr` command such as `callr::r_bg` to spawn background tasks across different nodes of a compute cluster?
If not, could the existing w…
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Hello,
I'm trying to use Microsoft.HPC.SDK 6.3.8187-beta in my .NET 6.0 application to connect to Server 2012 R2 headnode with HPC Pack 2012 R2 installed. Is it possible? I have an exception below,…
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### Describe the bug
The clustering_experiments.sh and regression_experiments.sh (found in "/tsml-eval/_tsml_research_resources/soton/iridis/classification_experiments.sh") refer to accessing DataSet…
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Hi! Maybe you can help me with the following:
After creating a conda environment with
```
conda create --name aw_value python=3.10.13
conda activate aw_value
pip install value-nlp
pip insta…
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**Issue**
Hi, as a user I would like to have PBS (TORQUE) as an option for queue system so that I can run ERT through Everest in a HPC Cluster with PBS, as I can do today with ERT alone (to run Eclip…
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Hi, I used bambu on one sample. The alignment result(.bam) of this sample is about 34G. And I run bambu on HPC cluster. I set the cpu number to 20. Then run it. But it took 6 hours to finish the job. …
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We are building supercomputing infra for an internal GPU cluster up to thousands of expensive GPUs.
We are looking to adopt mpi-operator, or slurm.
slurm is widely adopted in large-scale hpc compu…