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I made a simple program to try out the marching cubes algorithm.
ImgOpener imgOpener = new ImgOpener();
Img img = (Img) imgOpener.openImgs(
new File(args[0]).getAb…
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In Fiji I have a minimal script. I just want to threshold an 8-bit image:
```groovy
#@ OpEnvironment ops
#@ ImgPlus img
thresh = ops.op("threshold.mean").input(img).apply()
```
This produc…
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Hello ijp-kheops team! I'm helping out a team close to me with slide digitization, I'm trying to incorporate this library into a script and workflow. I'm starting with a sequence of tiff images that h…
ohkio updated
1 month ago
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We want to add JPMS module descriptors to the core ImgLib2 artefacts. This issue tracks overall progress on this.
## Which repos should be included in this effort?
Which repos should become imgl…
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- [ ] Set `net.imglib2.ij`.
- [ ] Move all classes under the `net.imglib2.ij` package.
- [ ] #38
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```python
In [97]: from net.imglib2.outofbounds import OutOfBoundsFactory
In [98]: c = env.op("filter.gauss").inType(Img, Double.TYPE, OutOfBoundsFactory).outType(Img).computer()
In [99]: c
Ou…
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Ensure imglib2-algorithm can declare all its functionality as ops in a dependency-light (or even dependency-free—e.g. XML? Spring? see #55) way.
Of course, the imglib2-algorithm-side work is not te…
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Hey yxdragon,
ImagePy looks great. I don't know if you're aware of [imglib2-imglyb](https://github.com/hanslovsky/imglib2-imglyb), but that is a native bridge between existing JVM-based ImageJ and …
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The [current list](https://github.com/imagej/imagej-opencv/blob/93dec2fe934dc74fc0e96ed0e208995958e34e85/src/main/java/net/imagej/opencv/ImgToMatConverter.java#L115-L118) is missing many integer types…
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See forum post:
https://forum.image.sc/t/help-for-abba-in-fiji-ptbiop-update-and-spline-registration-issue/97673/5