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Dear Authors,
Thank you for developing such a valuable tool. I am currently using Juicer Tools for my de novo vertebrate genome assembly. After executing the following command:
java -jar -Xmx100G …
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### Before Reporting 报告之前
- [X] I have pulled the latest code of main branch to run again and the bug still existed. 我已经拉取了主分支上最新的代码，重新运行之后，问题仍不能解决。
- [X] I have read the [README](https://github…
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hi yufanzhou
your method is very useful . but i have a little question. the juicer's result, like "resule.hic", whether it can be deal with HiSIF.
if it can , how shou i do ?
i will …
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Hi
I downloaded the K562 Hi-C result: [ENCFF621AIY.hic](https://www.encodeproject.org/files/ENCFF621AIY/) from ENCODE.
Then I ran **juicebox_dump.py** for compute the **hic_gamma** and **hic_scal…
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Hi, im trying to change the MultiJuicer Logo at initial "Getting Started" page where users can create a team.
The logo & favicon I added in values.yaml works - but only on the authenticated shop pa…
Ak-wa updated
3 weeks ago
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I have:
- [x] [Searched all issues](https://github.com/Templarian/MaterialDesign/issues) to make sure there isn't a request for this icon.
- [x] [Searched the current library](https://material…
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Dear Teacher Zeng：
I use the Run HapHiC scaffolding pipeline for building pseudomolecules，My script is as follows：
~/HapHiC/haphic pipeline \
~/Musa_analysis/06_polish/01_rundir/genome.nextpolish.f…
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### Before Asking 在提问之前
- [X] I have read the [README](https://github.com/alibaba/data-juicer/blob/main/README.md) carefully. 我已经仔细阅读了 [README](https://github.com/alibaba/data-juicer/blob/main/README…
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Hello!
I am wondering if you run Juicer to produce the duplicate-free list of paired alignment with default parameters, or if you went for more stringent alignment parameters, like "only perfect matc…
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Hello,
I created a contact file with bam2 juicer on unfiltered .bam reads aligned by recommendations from this link:
https://phasegenomics.github.io/2019/09/19/hic-alignment-and-qc.html
However…