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### Scenario trees/lattice reading
Scenarios for multistage stochastic programs
https://www.karlin.mff.cuni.cz/~kopa/papers/vanc-ed.pdf
Overview of scenario tree generation methods, applied in …
msz13 updated
2 weeks ago
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Hi, is there a method in Deeptime similar to Pyemma's " pyemma.coordinates.save_traj" which can be used to extract pdb structures representing macrostates after coarse-graining using PCCA+
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In calculating modularity Q I get the following error in my script that uses the markov_clustering package:
```
Traceback (most recent call last):
File "mcl_3_inflat_test.py", line 48, in
…
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### Is this a new feature, an improvement, or a change to existing functionality?
New Feature
### How would you describe the priority of this feature request
Critical (currently preventing us…
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Hello,
I am trying to use draw_graph but there is an error that:
module 'markov_clustering' has no attribute 'draw_graph'.
The same is working in google colab but not in jupyter notebook.
Could yo…
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I just copied the README example in a python console:
```
Python 3.7.3 (default, Mar 27 2019, 22:11:17)
[GCC 7.3.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" f…
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Just tried to run the example code given on github readme.
import markov_clustering as mc
```
import networkx as nx
import random
# number of nodes to use
numnodes = 200
# generate random…
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Hi @aashish24, do we want all the processes that are currently listed under spatial dynamics?
http://pysal.readthedocs.org/en/latest/library/spatial_dynamics/index.html
- spatial_dynamics.directional …
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Hello everyone, I am using Gephi 0.9.2. I need a few clustering algorithms like Label propagation and Markov Clustering. Could anyone guide how I can get it?
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Hi
I was wondering if we could make this package available via conda? The we can only install onto our servers via conda so I am unable to use this as it stands.
Thanks