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Disturbed microbial ecology in Alzheimer’s disease: evidence from the gut microbiota and fecal metabolome – Jianxiong Xi – BMC Microbiology
https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12…
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What types of data visualizations would be useful for the analysis or interpretation of your microbial ecology or metabarcoding datasets? We want ideas for data visualizations that would be useful for…
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Notes for the meeting with Dr. Mcpharland.
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This looks great! I think it might be good to add a references or refs folder. For genomics/microbial ecology project we often use references to map our data against or for classifying sequences. We f…
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Thank you so much for such a detailed user guide, it is very helpful for beginners like me. I'm a microbial ecology researcher and often deal with longer microbiology terms. I like the lower triangle …
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### What kind of feature would you like to request?
Additional function parameters / changed functionality / changed defaults?
### Please describe your wishes
It would be extremely helpful …
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# Scenario 4: Microbial Regnets
The human gut microbiome is an increasingly important area of study for multiple infectious diseases and chronic conditions, including COVID-19 and long COVID. Howev…
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Ref: Pat Schloss' [recent analyses](https://www.biorxiv.org/content/10.1101/2023.06.23.546313v1.full.pdf) on rarefaction in alpha & beta diversity. This addressess well some of the long debates and co…
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Hi there!
I work with ecological data, in particular microbial ecology, and we cannot use Euclidean distance for comparing community dissimilarities (either using cluster analysis, PCoA, or NMDS) s…
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Hello,
Kind of a weird 'issue' as it's more a 'forum like' topic.
I am completely new to JSDMs and have some questions about some thoughts I had about how to use them.
For instance :
- How i…