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Should "brain lymphatic endothelial cell" be added to the AO? How do they relate to the "lymphatic endothelial cluster" already in the AO?
From Huisman et al. (PMID 34487573, ZDB-PUB-210907-11)(Men…
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Hi Ying,
Thank you for sharing the submission example. In the example, the input data is '.mha' format and output is saved to '.mha' as well. However, the '.nii.gz' format were used for both second…
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@jkh1 @valeiibb
This is a more general question: There are many derived features, which are non-linear combinations of more basic features. For example, simple ratios: `Area / ConvexArea`. One can th…
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I think this feature is missing in the plugin.
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* Research on Models that are compatible with the collected datasets
* List available models from IDMS
* Upload models with metadata to IDMS
* Select models based on the loaded image and available met…
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Hi,
Have you heard about the plugin FracLac to quantify "hard to analyze morphologies" (fractal dimension and lacunarity measurements)?
[Karperien et al 2013 Front Cell Neurosci.pdf](https://github.…
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When I saw this figure (Walker 2014 37:1-14; Brain behav Immun), I thought that if we had a way
to measure the orientation of the branches: longitudinal (B) or radial (C), we may have a way to discri…
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I am sorry Christian, we still don´t understand how you calculate it and what it corresponds to. Do you take into account the polarization of the cell? Can it be considered as the diameter of the soma…
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Can we consider the brightest point as the mass center? gravity center? I understand that we will measure the distance between brightest point and centroid. Thanks.
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Hi Christian,
We finished the segmentation of the movies with Aleix. I have just tried to run the morphometry plugin. Are you updating it because right now I got a message error? Please, let me know …