-
## Description
When running the contrast-agnostic model as part of SCT v6.4 on GPU using `CUDA_VISIBLE_DEVICES=1 SCT_USE_GPU=1` (see our [wiki](https://github.com/spinalcordtoolbox/spinalcordtoolbo…
-
I noticed that at multiple instances, the QC report was removed, see eg:
https://github.com/spinal-cord-7t/coil-qc-code/blob/a6a8017de62ad80457bc7dbb7bd02033a05160ad/data_processing-human.ipynb#L10…
-
### Description
@naga-karthik sent me a [new version of the model](https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v2.4/model_soft_bin_20240425-170840.zip) fo…
-
### Description
Running a processing pipeline on `joplin`, the QC report crashed because of a permission issue:
Terminal output
```console
--
Spinal Cord Toolbox (git-jca/4527-register-te…
-
### Description
I intalled the lastest master's version (`git-master-56c7f6cdb0f763f1e287a3255b25ab532e257a00*`)
And when running sct_check_dependencies, I get this user warning:
```python
Che…
-
Hi, thanks for open source this great mr2ct translation work!
Here I got one problem as shown in the title. I downloaded the repo in my local environment and ran the code using the example T1. I di…
-
**Submitting author:** @mathieuboudreau (Mathieu Boudreau)
**Repository:** https://github.com/shimming-toolbox/rf-shimming-7t
**Branch with paper.md** (empty if default branch): main
**Version:** r202…
-
## Context
The `sct_label_vertebrae` function currently works by using a C2-C3 disc detector, then using a template-matching, similarity measure-based approach to identify discs. In other words, it…
-
### Information
Contrast: T1w
Region: Thoracic
Pathology: Healthy
SCT model: https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v2.4/model_soft_bin_20240425-1…
-
## Related issues
- https://github.com/spinalcordtoolbox/spinalcordtoolbox/issues/1572
- https://github.com/spinalcordtoolbox/spinalcordtoolbox/issues/2489
- https://github.com/spinalcordtoolbox/…