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Hi @matteofrigo @rutgerfick We are trying to follow this example: (https://nbviewer.jupyter.org/github/AthenaEPI/dmipy/blob/master/examples/example_multi_compartment_spherical_mean_technique.ipynb) bu…
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@rutgerfick We are trying to run a multi-tissue, multi-compartment SMT model, with the classic stick and zeppelin bundled together, and tortuosity and equality constraints included. We have precalcu…
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the dipy dtifit is often called to fit the tensor and calculate the classical FA, AD and RD measures in various dmipy models. I would like to incorporate an anisotropic diffusion compartment into a mu…
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# Dmipy: Diffusion Microstructructure Imaging in Python Made Easy
***By Rutger Fick, TheraPanacea***
- Theme: Open Workflows
- Format: Keynote
## Abstract
Rutger Fick, Matteo Frigo, Sara Sedlar, Rac…
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Hi @rutgerfick,
Last we spoke we had discussed splitting up shells for calculations of various compartments. We have a dataset with _b=0,500,1000,2000_ and we were going to try and use the _b=0,500,1…
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Page "Background":
I would write: "Tools like algebra, calculus, Newtonian mechanics …
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It seems that the most uncontroversial way to represent this is to have the [meningeal cluster](http://purl.obolibrary.org/obo/UBERON_0010743) be surrounding yet spatially disjoint from the the brain …
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@matteofrigo @rutgerfick In your example for NODDI Watson (https://nbviewer.jupyter.org/github/AthenaEPI/dmipy/blob/master/examples/example_noddi_watson.ipynb) at the very end you explain that to get …
TMNir updated
3 years ago
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Hi @matteofrigo @rutgerfick
As mentioned before we are cascading a full ICVF map into a multi-tissue MCMDI 3 compartment model. We are inputting the tissue responses which are in the range of the ori…
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Hi,
I'm not entirely sure, if this is the right place to discuss this. if not it would be great if someone could point me to the appropriate place.
I'm currently thinking about SBML IO and SBML Id…
tpfau updated
7 years ago