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I was thinking that multi-echo data could be leveraged in fMRIPost-rapidtide by ingressing outputs from [fMRIPost-tedana](https://github.com/ME-ICA/fmripost-tedana) (once it's up and running). Since t…
tsalo updated
2 months ago
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@cesarcaballerogaudes @eurunuela @idevicente have any of you tried applying phase regression to multi-echo data? Asking you three because of your connections to https://github.com/idevicente/Phase-bas…
tsalo updated
1 month ago
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### What happened?
I ran fmriprep on multi echo data, but the outputs did not create any of the multi echo files
Input BIDS:
. I basically took the first echo from a multi-echo run and removed the echo entity to sim…
tsalo updated
2 weeks ago
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**Describe the bug**
Both ModSecurity 2, ModSecurity 3 as well as Coraza are translating U+062F and U+D8AF to slash leading to a false positive with the CRS path traversal rule 930110.
Link to C…
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As @cncastillo mention in a previous email: """... we are not currently handling the counters properly. I think I implemented this before Pulseq added counters LABELs as part of EXTENSIONS. It is a ve…
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### Summary
In the past we supported running PCA+ICA on spatially concatenated multi-echo data. We ended up dropping the associated argument (`--sourceTEs`) because (1) it wouldn't work with MA-PCA…
tsalo updated
1 month ago
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Spent a while tracking down an issue where the number of HMC transforms mismatched the number of volumes in a BOLD series. Turned out is was multi-echo data where echos 1 & 2 had n volumes, and the th…
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Multi-echo sequence for fat/water imaging
- oil/water phantom
- salami phantom
Magnitude and phase images to show susceptibility contrast
- non-ferrous metal in water
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## Current Behavior
Running `dune fmt` turns multi-line strings into normal strings.
Example from cram tests:
```
In multi-line strings, newlines are escaped, but their syntax is not preserved.
…
maxRN updated
1 month ago