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Have been trying to run this function using micro_sam as a python library. Not only when calling it on its own to segment my own segmentations but also when running automatic 3D segmentation through t…
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Hello, as an example, the specific function of `multicut_kernighan_lin`, which I learned and tried to run in pycharm. I'd like to see the source code of its specific algorithm (intuition tells me it's…
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I am trying to use the Multicut workflow on a large 3D dataset and I keep getting the below error after several hours of attempting to calculate the superpixels. Does anyone know a way to fix this or…
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Multicut tool is embedded under a segment layer and then under a graph tab. It takes multiple clicks and quite some mouse movement to activate it. It would be great to have a hotkey to activate it qui…
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### Is this a new feature, an improvement, or a change to existing functionality?
New Feature
### How would you describe the priority of this feature request
High
### Please provide a clear descri…
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Running multicut in headless mode fails with a (very long exception). I have tried this with `1.4b021` and `1.4b025` on two linux systems.
## To reproduce
The data (and script) is located here: …
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ERROR:
calling solver: /home/yulijun/deepcut/external/solver/solver-callback /home/yulijun/deepcut/data//mpii-multiperson/multicut//problem-0002.h5 /home/yulijun/deepcut/data//mpii-multiperson/mul…
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Hi!
Ilastik seems to just randomly hang every now and then when I'm working with the multicut workflow. I couldn't determine any clear pattern, but in the last two days I think it became completely…
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implement min-st-cut interface similar to multicut/lifted multucut
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First of all, thank you for your efforts to develop nice APIs. To understand lifted multicut, I am now trying to execute two example programs in the Nifty documentation:
‘plot_agglomerative_clusterin…