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The metabolic pathways are very hard to consume when they display all of the small molecules.
It would be better if there was a toggle to "collapse small molecules" so that you could see only the…
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Could we remove the Parentage "GO:0032993 protein-DNA complex
From kinetochore and chromatin
otherwise we can't make "occurs_in" annotations to them In Noctua
https://github.com/geneontol…
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The RAM is getting overloaded because the unique entities and relations are stored in RAM memory on GPU nodes of Noctua 1 (180GB usable main memory) and on Noctua 2 (470GB usable main memory). This le…
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### Annotation Entry
- [x] Curators can autocomplete on any annotatable entity in NEO
- [x] Gene
- [x] Protein
- [x] ncRNA
- [x] Protein-containing complex (including for now)
- [x] If a curator…
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This issue stems from development of the new Noctua standard annotation form. https://github.com/geneontology/noctua-standard-annotations/issues/24
In GO-CAMs and Noctua, interacting taxa are capt…
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During the testing of the MGI import to GOC project, I noticed one of our gene-centric models (Cntn2) failed to be exported into MGI from Noctua. Further looking into the model shown: the model was mo…
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e.g. https://noctua.apps.renci.org/model/AOP_15
We might be able to put a redirect to e.g. https://noctua.apps.renci.org/editor/graph/gomodel:AOP_15
Jim says it would be better if we point to th…
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As curators can currently do in the production Noctua form, add functionality to autopopulate a root node annotation.
We will need to specify each GO aspect distinctly, i.e. add BP root annotation,…
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instead of https://github.com/geneontology/noctua/issues/896 as a 'stop gap'
I tried instead to use the rpb1 unmodified form where I *could* see the annotation)
However, the MF did not display…
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Our model
http://noctua.geneontology.org/workbench/noctua-visual-pathway-editor/?model_id=gomodel%3A66187e4700001781
has
dicer (dcr1) provides input for argonaut (ago1)
but in the gocam-vi…