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The package needs to deploy PH engines in as similar a way as possible to [{ggtda}](https://github.com/tdaverse/ggtda). The syntax should be decided and harmonized before either package is submitted t…
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ImportError: /TopoGDN-main/torch_persistent_homology/persistent_homology_cpu.cpython-37m-x86_64-linux-gnu.so: cannot open shared object file: No such file or directory
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Hi author, how do I install torch-persistent-homology==0.1.
when I type
`pip install torch-persistent-homology==0.1`,
it will output
```
ERROR: Could not find a version that satisfies the requ…
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Ripser is an implementation of Vietoris-Rips complex calculation for applications in persistent homology. The library is written in C++ (I think?), but there is a Python wrapper library.
## Why
P…
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Hi, I am using part of your `topology.py` script to calculate the persistent homology dimension for the embeddings of a protein language model (ESM-2) and the dimension estimate show low error but see…
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Were you able to dig up examples for this?
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> The ``boundary_matrix`` class takes a "Representation" class as a parameter.
> This representation defines how columns of the matrix are represented and how
> low-level operations (e.g., column ad…
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As stated in the roadmap, currently, `guddhi` and `giotto-ph` are used for various purposes. We want to be able to allow the user to specify which backend to use, and also provide sane defaults if the…
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Hi!
I wanted to use your library while building an adaptation of [TOGL](https://github.com/BorgwardtLab/TOGL). I installed it with pip and everything checked out, but now that I try to import it:
…
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Dear Admin
Is it possible to run persistent homology (PH) just for a specific dimension say k=3 or k=5?
Currently, Javaplex runs PH from 0 to k, is it possible to just run one dimension?
The re…