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I and @valerianilucrezia were discussing with @caravagn about what would be useful for the `simulate_seq` function to return.
As today, it returns only the sequencing results, but we feel like it w…
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### Model description
The Seq TransfoRNA model is intended to map short RNA fragments (18 nt. to 30 nt.) back to their parental precursor. The model is trained in a supervised manner to classify ~2…
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### What happens, and what did you expect instead?
https://github.com/igraph/rigraph/pull/1330#discussion_r1665753951
We also need the `by` argument to ensure that the output is a numeric.
Perh…
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Exclude_seq is very basic and should be made more generic so that it uses some kind of command line regex to also extract_named_seq
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Constantine does not use `seq` to ensure it does not depend on Nim runtime and to allow end user to pick their allocator of choice, for example jemalloc for long-running application or mimalloc. This …
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Corals for 116 _stranded_ RNA-seq libraries
Sending RNA
20M reads
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Dear authors of Remora,
I am trying to extract features from basecalls (io_read.seq), reference sequence (io_read.ref_seq) and signals from the io_read object generated from pod5 and bam.
I am c…
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### 🚀 The feature, motivation and pitch
Supporting these architectures would enable benchmarking popular models such as T5 and BART. Most of the benchmarking suite should be identical to the decoder …
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Use case, tag a comment with #QA or #Legal or #TempVFX in order to filter on them in the future.
From [SyncLinear.com](https://synclinear.com) | [SEQ-1684](https://linear.app/sequencefilm/issue/SEQ-1…
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我想咨询一下v2的训练是抛弃掉随机采样训练,直接使用v1的序列及训练方法吗?仅仅是使用倒放的方式扩充了数据集?