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## Description
The objective would be to generate susceptibility maps of the spine and the brain using segmentations generated for the dataset `whole-spine`.
## Current state
Currently, segme…
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Dear experts,
First of all, thank you for this tool and making your pre-trained models publicly available. I tried to conduct the WMH segmentation in one subject using a T1w and a FLAIR image of…
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Hi,
Would you please update the download link of multi_site_2d_transformer_Unet_mit_b5_0.81.pth and pmb_2d_transformer_Unet_mit_b5.pth?
Thanks
Hua
zhhsf updated
4 months ago
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# Description
- The strategy to implement pre-trained models in PARADIM is to do it via Docker and using a `script.py` that take a `dicom folder as input` and generate a `dicom folder as output` (seg…
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# Description
Given that we have multicentre MS 3T MP2RAGE data that includes the brain and spinal cord, and also that some models have been developed to segment MS lesions in the brain (robust even …
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https://github.com/ANTsX/ANTsPyNet/blob/d39ee8333149a84f6bb72b217419dacfd3872a0d/antspynet/utilities/white_matter_hyperintensity_segmentation.py#L76-L79
causes an error in some installations of pyt…
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Hi , I have read your paper, the work is awesome. But I'm not quite sure how the model $M_{R_{WHM},R_{tum}}$ was trained. It was trained on the real FLAIR volumes from the SABRE dataset, and the BRATS…
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### Description
We want to update SPM12 and CAT12 to a more recent version; it probably makes sense to update both at the same time given their interdependence, and carefully test several scenarios…
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We are very interested in applying this to our acute stroke data sample (over 3000 participants).
Are there any plans for a docker image?
I have been having trouble getting both the preparation and …
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Hello,
I am trying to create the headreco FEM mesh but it fails due to CAT segmention. Following is the terminal output of MATLAB. Can anyone suggest me a solution. It would be very helpful... Tha…