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[REVIEW]: r3 #115

Closed med-oc closed 10 months ago

med-oc commented 10 months ago

Submitting author: !--author-handle-->@max-anu<!--end-author-handle-- (Max Proft) Repository: https://github.com/rbeucher/med-portal-intake-tutorial Branch with paper.md (empty if default branch): max Version: v1 Editor: !--editor-->@max-anu<!--end-editor-- Reviewers: !--reviewers-list-->@max-anu<!--end-reviewers-list-- Archive: 10.21105/medportal.00115

Status

status

Status badge code:

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Markdown: [![status](https://medportal-dev-6a745f452687.herokuapp.com/papers/c08625da21aaf8266617276329ae3832/status.svg)](https://medportal-dev-6a745f452687.herokuapp.com/papers/c08625da21aaf8266617276329ae3832)

Reviewers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Reviewer instructions & questions

@max-anu, your review will be checklist based. Each of you will have a separate checklist that you should update when carrying out your review. First of all you need to run this command in a separate comment to create the checklist:

@med-oc generate my checklist

The reviewer guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @max-anu know.

✨ Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest ✨

Checklists

@max-anu, please create your checklist typing: @med-oc generate my checklist

med-oc commented 10 months ago

Hello humans, I'm @med-oc, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@med-oc help

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@med-oc generate pdf
max-anu commented 10 months ago

@med-oc set 10.21105/medportal.00115 as archive

max-anu commented 10 months ago

@med-oc accept

med-oc commented 10 months ago

Paper is not ready for acceptance yet, the archive is missing

med-oc commented 10 months ago

Done! archive is now 10.21105/medportal.00115

max-anu commented 10 months ago

@med-oc accept

med-oc commented 10 months ago 
Doing it live! Attempting automated processing of paper acceptance...
med-oc commented 10 months ago

The paper's PDF and metadata files generation produced some warnings that could prevent the final paper from being published. Please fix them before the end of the review process.

replacing image with description
med-oc commented 10 months ago

:warning: Couldn't acccept/publish paper. An error happened. The generated XML metadata file is invalid. 

ID figU003Acatalog-flow already defined