AFM-SPM / TopoStats

An AFM image analysis program to batch process data and obtain statistics from images
https://afm-spm.github.io/TopoStats/
GNU Lesser General Public License v3.0
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Fixes for height-biasing of skeletons #815

Closed llwiggins closed 3 months ago

llwiggins commented 3 months ago

This PR removes the default height_bias parameter within skeletonisation classes and functions as this parameter is instead pulled in through the config file. The default height_bias parameter is set to 0.6 within the config file which means that the lowest 60% of pixels will be removed within each skeletonisation iteration, this value can be adjusted within the config file.