AIM-Harvard / SlicerRadiomics

A Slicer extension to provide a GUI around pyradiomics
BSD 3-Clause "New" or "Revised" License
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Cannot use the module with input mask defined by a segmentation node #67

Open fedorov opened 2 years ago

fedorov commented 2 years ago

This user report below summarizes the issue, which is reproducible with the latest nightly and stable releases of Slicer. It appears that the generator succeeds in creating a label node representation in https://github.com/AIM-Harvard/SlicerRadiomics/blob/master/SlicerRadiomics/SlicerRadiomics.py#L544-L550, and also if the segmentation is exported into a labelmap node, then feature extraction works with that labelmap node defining the mask.

https://discourse.slicer.org/t/support-3d-slicer-and-pyradiomics/18474