[FEAT EXTRACTION] Hi everyone, previously, I used the segmentation from LifeX and then apply for Pyradiomics ( file mask.nii). Now, I am wondering if I can do the segmentation directly from Pyradiomics. Thanks for your consideration. OS: Window 10 ; Python version:3.6; Pyradiomics version: 3.0.1

[trangphan046]

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To Reproduce Steps to reproduce the behavior:

Version (please complete the following information):

• OS: [e.g. iOS]
• Python version: [e.g. 3.6]
• PyRadiomics version [e.g. 2.2.0]

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[fedorov]

I am wondering if I can do the segmentation directly from Pyradiomics

No, you cannot, but you can use 3D Slicer for this purpose, and pass the resulting segmentations to pyradiomics using SlicerRadiomics extension: https://www.slicer.org/.

[trangphan046]

I am wondering if I can do the segmentation directly from Pyradiomics

No, you cannot, but you can use 3D Slicer for this purpose, and pass the resulting segmentations to pyradiomics using SlicerRadiomics extension: https://www.slicer.org/.

Thank you so much but if I use 3D Slicer, it would be the same as LifeX, right?

[fedorov]

I have never used LifeX. I do not know.