My code gets killed while trying to extract Wavelet features

AIM-Harvard / pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

http://pyradiomics.readthedocs.io/

BSD 3-Clause "New" or "Revised" License

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My code gets killed while trying to extract Wavelet features #799

Open Leylaastro opened 1 year ago

Leylaastro commented 1 year ago

Describe the bug Does anyone have an idea why my code gets killed while trying to extract wavelet features using pyradiomics and the params file? I tested it for 1 CT image and it got killed. Could it be the memory problem?

BhaskarS1ngha commented 1 year ago

Could be, the wavelet features extraction is memory hungry.

Leylaastro commented 1 year ago

@BhaskarS1ngha Thank you for the reply. I am running the code on an oracle virtual box. Is increasing the RAM dedicated to the virtualbox the only way to stop the code getting killed?

BhaskarS1ngha commented 1 year ago

Increasing the RAM for the VM might work. If you're running it as a parallel pool of workers then you should limit the number of workers to just 1 until your RAM issue is solved.