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AIM-Harvard / pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics
http://pyradiomics.readthedocs.io/
BSD 3-Clause "New" or "Revised" License
1.11k stars 485 forks source link

Command line usage documentation [Question] #841

Open jrenslo opened 8 months ago

jrenslo commented 8 months ago

Minor suggestion, but for completeness sake it would be helpful to know what dimension and format of images are supported, and what the expected format of the "mask" image should be (which I assume is dependent on the input image as well?).

The command line usage notes in the documentation is quite sparse, and after digging around a bit it appears that you are using SITK to import images, and expecting a binary, UInt32 mask (though I wasn't able to figure out if multiple labels are supported). I also assume the mask shape must match the input image shape.

jrenslo commented 8 months ago

it appears some of the information is in the FAQ, sorry!