Bump shap from 0.41.0 to 0.42.0

[dependabot[bot]]

Bumps shap from 0.41.0 to 0.42.0.

Release notes

Sourced from shap's releases.

v0.42.0

This release incorporates many changes that were originally contributed by the SHAP community via @​dsgibbons's Community Fork, which has now been merged into the main shap repository. PRs from this origin are labelled here as fork#123.

This will be the last release that supports python 3.7.

Added

• Added support for python 3.11 (fork#72 by @​connortann).
• Added n_points parameter to all functions in shap.datasets (fork#39 by @​thatlittleboy).
• Added __call__ to KernelExplainer (#2966 by @​dwolfeu).
• Added contributing guidelines (#2996 by @​connortann).

Fixed

• Fixed plot.waterfall to support yticklabels with boolean features (fork#58 by @​dwolfeu).
• Prevent TreeExplainer.__call__ from throwing ValueError when passed a pandas DataFrame containing Categorical columns (fork#88 by @​thatlittleboy).
• Fixed sampling in shap.datasets to sample without replacement (fork#36 by @​thatlittleboy).
• Fixed an UnboundLocalError problem arising from passing a dictionary input to shap.plots.bar (#3001 by @​thatlittleboy), (fork#36 by @​thatlittleboy).
• Fixed an UnboundLocalError problem arising from passing a dictionary input to shap.plots.bar (#3001 by @​thatlittleboy).
• Fixed tensorflow import issue with Pyspark when using Gradient (#2983 by @​skamdar).
• Fixed the aspect ratio of the colorbar in shap.plots.heatmap, and use the ax matplotlib API internally for plotting (#3040 by @​thatlittleboy).
• Fixed deprecation warnings for numba>=0.44 (fork#9 and fork#68 by @​connortann).
• Fixed deprecation warnings for numpy>=1.24 from numpy types (fork#7 by @​dsgibbons).
• Fixed deprecation warnings for Ipython>=8 from Ipython.core.display (fork#13 by @​thatlittleboy).
• Fixed deprecation warnings for tensorflow>=2.11 from tf.optimisers (fork#16 by @​simonangerbauer).
• Fixed deprecation warnings for sklearn>=1.2 from sklearn.linear_model (fork#22 by @​dsgibbons).
• Fixed deprecation warnings for xgboost>=1.4 from ntree_limit in tree explainer (#2987 by @​adnene-guessoum).
• Fixed build on Windows and MacOS (#3015 by @​PrimozGodec; #3028, #3029 and #3031 by @​connortann).
• Fixed creation of ragged arrays in shap.explainers.Exact (#3064 by @​connortann).

Changed

• Updates to docstrings of several shap.plots functions (#3003, #3005 by @​thatlittleboy).

Removed

• Deprecated the Boston house price dataset (fork#38 by @​thatlittleboy).
• Removed the unused mimic.py file and MimicExplainer code (fork#53 by @​thatlittleboy).

Maintenance

• Fixed failing unit tests (fork#29 by @​dsgibbons, fork#20 by @​simonangerbauer, #3044 and fork#24 by @​connortann).

... (truncated)

Changelog

Sourced from shap's changelog.

0.42.0 - 2023-07-05

This release incorporates many changes that were originally contributed by the SHAP community via @​dsgibbons's Community Fork, which has now been merged into the main shap repository. PRs from this origin are labelled here as fork#123.

Added

• Added support for python 3.11 (fork#72 by @​connortann).
• Added n_points parameter to all functions in shap.datasets (fork#39 by @​thatlittleboy).
• Added __call__ to KernelExplainer (#2966 by @​dwolfeu).
• Added contributing guidelines (#2996 by @​connortann).

Fixed

• Fixed plot.waterfall to support yticklabels with boolean features (fork#58 by @​dwolfeu).
• Prevent TreeExplainer.__call__ from throwing ValueError when passed a pandas DataFrame containing Categorical columns (fork#88 by @​thatlittleboy).
• Fixed sampling in shap.datasets to sample without replacement (fork#36 by @​thatlittleboy).
• Fixed an UnboundLocalError problem arising from passing a dictionary input to shap.plots.bar (#3001 by @​thatlittleboy). (fork#36 by @​thatlittleboy).
• Fixed an UnboundLocalError problem arising from passing a dictionary input to shap.plots.bar (#3001 by @​thatlittleboy).
• Fixed tensorflow import issue with Pyspark when using Gradient (#2983 by @​skamdar).
• Fixed the aspect ratio of the colorbar in shap.plots.heatmap, and use the ax matplotlib API internally for plotting (#3040 by @​thatlittleboy).
• Fixed deprecation warnings for numba>=0.44 (fork#9 and fork#68 by @​connortann).
• Fixed deprecation warnings for numpy>=1.24 from numpy types (fork#7 by @​dsgibbons).
• Fixed deprecation warnings for Ipython>=8 from Ipython.core.display (fork#13 by @​thatlittleboy).
• Fixed deprecation warnings for tensorflow>=2.11 from tf.optimisers (fork#16 by @​simonangerbauer).

... (truncated)

Commits

• c94ebab FIX: Remove breaking instance of ragged array (#3064)
• dd63adb Bump version (#3058)
• c1a2264 CHORE: Explicit random seed for tests (#3048)
• 974d996 Add publish step to TestPyPI (#3014)
• 738888e CHORE: changelog updates (#3054)
• 2e9a4e6 Fixup pycodestyle issues (#3050)
• d0db73f FIX: update code coverage configuration for installed package (#3033)
• 507d262 FIX: Add fixture to set pyspark python driver (#3044)
• 8f9f7d1 CHORE: Use faster test translation scenario, cut CI time by ~5mins (#3046)
• 9d72ec7 docs: add cross referencing to several plots functions (#3005)
• Additional commits viewable in compare view

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