search

AJResearchGroup / nsphs_ml_qt

R package for nsphs_ml_qt
GNU General Public License v3.0
0 stars 1 forks source link

[RUNNING] Do a long run with M3d and p1 #50

Open richelbilderbeek opened 2 years ago

richelbilderbeek commented 2 years ago

At #42 it was determined that M1 M3d and p1 gave the best phenotypic predictions.

However, never it can be ruled out that in a later epoch things improve. Run #42 with M1 and p1 as long as the cluster permits.

richelbilderbeek commented 2 years ago

Use IL6RA with an R squared of 0.72, as seen at https://www.omicspred.org/Scores/Olink and article https://www.biorxiv.org/content/10.1101/2022.04.17.488593v1 :

Screenshot from 2022-06-15 12-34-43

richelbilderbeek commented 2 years ago

Just started this run:

End time: 2022-06-15T13:05:15+0200
Duration: 3 seconds
[richel@sens2021565-bianca ~]$ ./nsphs_ml_qt/scripts_bianca/20_start_issue_50.sh
richelbilderbeek commented 2 years ago 
[richel@sens2021565-bianca ~]$ sbatch nsphs_ml_qt/scripts_bianca/20_start_issue_50.sh 
Submitted batch job 25810
[richel@sens2021565-bianca ~]$ date
do jun 16 15:17:04 CEST 2022
richelbilderbeek commented 2 years ago

Still going strong:

Screenshot from 2022-06-20 10-37-58